2018 – X abstracts

189. Khafipour E†, Guo J, Zhang Z, Derakhshani H, Fehr KB, Sepehri S, and Plaizier JC. 2018. Keynote talk: Microbial ecology of the gastrointestinal tract, mammary glands and the reproductive tract of dairy cattle. 7th annual Symposium on Gut Health in Production of Food Animals, St. Louis, MO, USA, November 5-7.

188. Khafipour E†, Guo J, Zhang Z, Fehr KB, Derakhshani H, Sepehri S, and Plaizier JC. 2018. Invited Talk: High-grain feeding spectrum disorders: Impact on the gut and beyond – the microbiome perspective. ADSA Discover conference, Eaglewood Resort and Spa, Itasca, IL, USA, Oct 29-Nov 1.

187. Moossavi S, Sepehri S, Robertson B, Bode L, Goruk S, Field CJ, Becker AB, Mandhane PJ, Turvey SE, Moraes T, Subbarao P, Lefebvre DL, Sears MR, Khafipour E‡, and Azad MB‡. 2018. Iintegrated analysis of human milk microbiota, oligosaccharides and fatty acids in the CHILD cohort. 19th International Society for Research in Human Milk and Lactation (ISRHML) Conference, Kanagawa, Japan, Oct 6-11.

186. Guo J, Zhang Z, Derakhshani H, Yoon I, Plaizier JC‡, and Khafipour E‡. 2018. Effect of subacute ruminal acidosis (SARA) and Saccharomyces cerevisiae fermentation products on gastrointestinal microbiome of dairy cows. Joint Annual Meeting of American Society of Animal Science, and Canadian Society of Animal Science, Vancouver, BC, Canada, Jul 8-12.

185. Khafipour E†, Derakhshani H, Zhang Z, Fehr KB, Sepehri S, Guo J, and Plaizier JC. 2018. Invited Talk: The inter-related physio-ecology of the gastrointestinal tract, the mammary gland and the reproductive system in dairy and swine. Joint Annual Meeting of American Society of Animal Science, and Canadian Society of Animal Science, Vancouver, BC, Canada, Jul 8-12.

184. Moossavi S, Khafipour E‡, Mandhane PJ, the CHILD Study Investigators, and Azad MB‡. 2018. Breastmilk Microbiota and the Risk of Childhood Asthma: A Prospective Birth Cohort Study. International Human Microbiome Consortium, Killarney, Ireland, Jun 26-28. 

183. Plaizier JC†, Penner G, Khafipour E, and Steele MA. 2018. Invited Talk. Genomic alterations and implications on health: Gut and beyond. American Dairy Science Association Annual Meeting, Knoxville, TN, USA, Jun 24-27.

182. Zhao R, Khafipour E, Sepehri S, Azad MB, Beta T and Shen GX. 2018. Influence of Saskatoon berry powder on insulin resistance and intestinal microbiota in high fat-high sucrose diet-induced obese mice. XVIIIth International Symposium on Atherosclerosis, Toronto, ON, Canada, Jun 9-12.

181. Khafipour E†, Zhang Z, Rajendiran E, Pu S, and Jones PJ. 2018. Invited Talk: Dietary lipids and gut microbiome. American Oil Chemists’ Society Annual Meeting, Minneapolis, MN, May 6-9. 

180. Khafipour E†, Derakhshani H, Fehr KB, Zhang Z, Sepehri S, and Plaizier JC. 2018. Invited Talk: The inter-related microbial ecology of the gastrointestinal tract, the mammary glands and the reproductive system in dairy and swine: Potential for microbiome ecosystem therapeutics. Animal Microbiome Congress USA, Kansas City, MO, USA, Mar 21-22.

179. Zhang Z, Kwawukume A, Moossavi S, Sepehri S, Nyachoti CM, and Khafipour E†. 2018. Time series and correlation network analyses to identify the role of maternal microbiomes on development of piglet gut microbiome and susceptibility to neonatal porcine diarrhea. American Dairy Science Association Midwest Branch and American Society of Animal Science Midwest Section Joint Annual Meeting, Omaha, Nebraska, Mar 12-14.

178.  Zhang Z, Kwawukume A, Moossavi S, Sepehri S, Nyachoti CM, and Khafipour E†. 2018. Maternal microbiome influences neonatal piglet gut microbiome development and diarrhea. Keystone Symposia on Microbiome, Host Resistance and Disease, Banff, AB, Canada, Mar 4-8. 

177.  Moossavi S, Khafipour E‡, Sepehri S, Goruk , Field CJ, Becker AB, Mandhane PJ, Subbarao P, Turvey SE, Lefebvre DL, Sears MR, the CHILD Study Investigators, and Azad MB. 2018Sex-specific association of breastmilk microbiota with infant weight gain and obesity in the first 5 years in the CHILD Cohort. Keystone Symposia on Microbiome, Host Resistance and Disease, Banff, AB, Canada, Mar 4-8. 

 

2017 – 29 abstracts

176.  Jordaan EM, Cicek N, Derakhshani H, and Khafipour E‡. 2017. Investigation into the long-term operational and microbial stability and resilience of a dairy manure digester. 15th IWA World Congress on Anaerobic Digestion, Beijing, China, Oct 17-20.

175.  Jordaan EM, Cicek N, Derakhshani H, and Khafipour E‡. 2017. Response of microbial community to induced failure of anaerobic digesters through overloading with glucose and propionic acid followed by process recover. 15th IWA World Congress on Anaerobic Digestion, Beijing, China, Oct 17-20.

174.  Levesque C, Akhtar N, Huynh E, Walk C, Wilcock P, Zhang Z, Dyce P, De Lange CFM, Khafipour E, and Li J. 2017. The impact of epidermal growth factor (EGF) supernatant on pig performance and ileal microbiota. Annual Biotechnology Conference, Toronto, ON, Canada, Aug17-18. 

173.  Govia R, Sepehri S, Poliquin V, Birse K, Menticoglou S, Khafipour E, and Burgener A. 2017. Proteomic analysis of amniotic fluid from twelve cases of cervical incompetence and its association with length of latency. Annual Meeting of Infectious Diseases Society for Obstetrics and Gynecology, Park City, UT, USA, Aug 10-12.

172.  Jordaan EM, Cicek N, Derakhshani H, and Khafipour E. 2017. Microbial dynamics in dairy manure digester. Canadian Society for Bioengineering Annual Meeting, Winnipeg, MB, Canada, Aug 6-10.

171.  Fehr KB, Derakhshani H, Sepehri S, Plaizier JC, and Khafipour E†. 2017. The type of dairy stall bedding material: bacterial composition and influence on teat-end microbiome. Canadian Society for Bioengineering Annual Meeting, Winnipeg, MB, Canada, Aug 6-10. 

170.  Fehr KB, Derakhshani H, Sepehri S, Plaizier JC, and Khafipour E†. 2017. Dairy cow bedding material as an environmental source for milk microbiota. Canadian Society for Bioengineering Annual Meeting, Winnipeg, MB, Canada, Aug 6-10.

169.  Adhikari PA, Derakhshani H, Khafipour E, and Kim WK. 2017. Effect of fructoligosaccharides (FOS) on Salmonella colonization, immune response and ileal microbiome in laying hens challenged with Salmonella enteritidis. Poultry Science Association Annual Meeting, Orlando, FL, USA, Jul 17-20.

168.  Arrazuria R, Molina E, Serrano M, Tello M, Sevilla IA, Khafipour E, Pérez V, Hurtado A, Juste R, Garrido J, Elguezabal N. 2017. Diet induced microbiota and M-cell modifications in rabbit gut associated lymphoid tissue (GALT). FEMS 7th Congress of European Microbiologists, Valencia, Spain, Jul 9-13.

167.  Khafipour E, Derakhshani H, Fehr KB, Khalouei H, Zhang Z, Plaizier JC. 2017. Associations between gut, mammary and vaginal microbiomes in dairy cows: role in health and disease. Joint meeting of American Society of Animal Science and Canadian Society of Animal Science, Baltimore, MD, USA, Jul 8-12.

166.  Danscher A, Plaizier JC, Li SC, Azevedo P, Andersen PH, and Khafipour E†. 2017. Effects of a grain-based subacute ruminal acidosis (SARA) challenge in dairy cows on microbiota on the epithelia and in digesta throughout the digestive tract. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28.

165.  Senaratne VP, Khalouei H, Fehr K, Guo J, Zhang Z, Derakhshani H, Yoon I, Scott M, Crow G, Khafipour E, and Plaizier JC†. 2017. Effects of Saccharomyces cerevisiae fermentation products and subacute ruminal acidosis (SARA) on apparent digestibility of dry Matter, NDF and phosphorus in lactating dairy cows. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28.

164.  Guo J, Khalouei H, Fehr K, Senaratne VP, Zhang Z, Derakhshani H, Yoon I, Scott M, Crow G, Khafipour E, and Plaizier JC†. 2017. Effects Saccharomyces cerevisiae fermentation products on endotoxins and acute phase proteins in lactating dairy cows. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28.

163.  Derakhshani H, Plaizier JC, and Khafipour E†. 2017. The commensal microbiota of bovine mammary gland: cross-talk with host genotype and its potential role in modulating mastitis susceptibility. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28. (Accepted as one of the late breaking abstracts)

162.  Derakhshani H, Plaizier JC, and Khafipour E†. 2017. Bacterial ecosystem of the bovine mammary gland: potential role of foundation taxa in shaping mammary gland microbiota and modulating udder homeostasis. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28.

161.  Fehr KB, Derakhshani H, Sepehri S, Plaizier JC, and Khafipour E†. 2017. Effects of dairy environment on milk microbiota and mammary inflammation. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28.

160.  Fehr KB, Derakhshani H, Sepehri S, Plaizier JC, and Khafipour E†. 2017. Effects of the environmental origin of milk microbiota on milk biodiversity. American Dairy Science Association, Pittsburgh, PA, USA, Jun 25-28.

159.  Khalouei H, Derakhshani H, Guo J, Azevedo P, Yoon I, Scott M, Crow G, Plaizier JC, and Khafipour E†. 2017. The impact of Saccharomyces cerevisiae fermentation products on the dynamics of rumen microbiota of dairy cow subjected to multiple bouts of subacute ruminal acidosis (SARA) challenge. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Canada, Jun 20-23.

158.  Cai Z, Sepehri S, Tenuta M, and Khafipour E†. 2017. Monitoring survivability of porcine epidemic diarrhea virus (PEDv) following surface application of PEDv-positive manure to the soil. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Canada, Jun 20-23.

157.  Cai Z, Sepehri S, Tun HM, and Khafipour E†. 2017. Monitoring survivability of porcine deltacoronavirus (PDCoV) in earthen manure storages co-infected with porcine epidemic diarrhea virus (PEDv). Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Canada, Jun 20-23.

156.  Khafipour A, Derakhshani H, Rabbi MF, Eissa N, Khafipour E‡, and Ghia JE. 2017. Denosumab, a monoclonal antibody to receptor activator of nuclear factor-Kappa B ligand (RANKL), modulates the gut microbiome dysbiosis in the context of experimental colitis. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Canada, Jun 20-23.

155.  Azad E, Derakhshani H, Forester R, Acharya S, McAllister TA, and Khafipour E‡. 2017. Bloat-associated shifts in the composition of rumen microbiota and mycobiota of cattle grazing on alfalfa pastures. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Canada, Jun 20-23.

154.  Derakhshani H, Plaizier JC, and Khafipour E†. 2017. The impact of bovine major histocompatibility complex (BoLA) gene polymorphism on the composition and dynamics of bovine milk microbiota during early lactation. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Canada, Jun 20-23.

153.  Moossavi S, Khafipour E‡, Sepehri S, Becker AB, Mandhane PJ, Subbarao P, Turvey SE, Lefebvre DL, Sears MR, the CHILD Study Investigators, and Azad MB. 2017. Maternal and early life factors influencing the human milk microbiota in the Canadian Healthy Infant Longitudinal Development (CHILD) cohort. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Jun 20-23.

152.  Moossavi S, Khafipour E‡, Sepehri S, Becker AB, Mandhane PJ, Subbarao P, Turvey SE, Lefebvre DL, Sears MR, the CHILD Study Investigators, and Azad MB. 2017. Human milk microbiota in the Canadian Healthy Infant Longitudinal Development (CHILD) cohort. Canadian Society of Microbiologists Annual Meeting, Waterloo, ON, Jun 20-23.

151.  Moossavi S, Khafipour E‡, Sepehri S, Robertson B, Bode L, Field CJ, Becker AB, Mandhane PJ, Subbarao P, Turvey SE, Lefebvre DL, Sears MR, the CHILD Study Investigators, and Azad MB. 2017. Integrated analysis of human milk hormones, fatty acids, oligosaccharides, and microbiota in the CHILD cohort. Federation of American Society for Experimental Biology Meeting Series: Origins and Benefits of Biologically Active Components in Human Milk, Lisbon, Portugal, Jun 16-21.

150.  Moossavi S, Khafipour E‡, Sepehri S, Robertson B, Bode L, Field CJ, Becker AB, Mandhane PJ, Subbarao P, Turvey SE, Lefebvre DL, Sears MR, the CHILD Study Investigators, and Azad MB. 2017. Structural equation modeling of determinants of human milk microbiota in the Canadian Healthy Infant Longitudinal Development (CHILD) cohort. Statistical Society of Canada Annual General Meeting, Winnipeg, MB, Canada, Jun11-14.

149.  Fehr KB, Derakhshani H, Sepehri S, Plaizier JC, and Khafipour E‡. 2017. Influence of dairy environment on the bacterial composition of milk and its contribution to mammary gland homeostasis. American Society for Microbiology, New Orleans, LA, USA, Jun 1-5.

148.  Mi RD, Kitchkeesick T, Farenhorst A, Zvomuya F, Khafipour E, and Kumar A. 2017. Detection of E. coli/total coliforms and antibiotic resistance genes in drinking water collected from three First Nation communities in Manitoba. 4th Annual CREATE H2O First Nation Water Rights Conference, Winnipeg, MB, Canada, Jun 1-2. 

 

2016 – 19 abstracts

147.  Dube-Smith J, Zhang Z and Khafipour E†. 2016. Assessing compost tea microbiology in providing pathogen-suppressive microbial communities to agricultural soils. 3rd Thünen Symposium on Soil Metagenomics, Braunschweig, Germany, Dec 14-16.

146.  Fehr KB, Derakhshani H, Khalouei H, Guo J, Tornopolski MN, Kalantarpour B, Plaizier JC, and Khafipour E. 2016. Mammary microbiome and udder health in dairy cows: Role of nutrition and environment. Manitoba Dairy Conference, Winnipeg, MB, Canada, Dec 7-9.

145.  Derakhshani H, Plaizier JC, and Khafipour E. 2016. Dynamics of mammary gland microbiome and its association with udder health and susceptibility to mastitis in dairy cows. Manitoba Dairy Conference, Winnipeg, MB, Canada, Dec 7-9.

144.  Penner GB, McAllister TA, Li S, Plaizier JC, Khafipour E, and Guan LL. 2016. The microbiome and animal health. Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

143.  Steele MA, Meale SJ, Khafipour E, Wood KC, and Penner GB. 2016. The adaptations of the calf gastrointestinal tract: pre and post-weaning. Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

142.  Li S, Moossavi S, Azevedo P , Schurmann BL, Górka P, PennerGB, Plaizier JC, and Khafipour E. 2016. Effects of duration of moderate increases in grain on bacterial diversity in the digestive tract of Holstein calves. Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

141.  Meale SJ, Li SC, Azevedo P, Derakhshani H, Plaizier JC, Steele MA, and Khafipour E‡. 2016. Does weaning age affect the development of ruminal and fecal microbiomes in dairy calves? Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

140.  Khalouei H, Alamouti AA, Mohammadi-Sangcheshmeh A, Farzaneh N, Plaizier JC, and Khafipour E. 2016.   Subacute ruminal acidosis negatively affects conception rate in Holstein heifers. Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

139.  Guo J, Plaizier JC, Li S, William SE, Khafipour E, and Dann HM. 2016. Effects of starch feeding on lipopolysaccharide (LPS) concentrations in rumen fluid and feces in fresh dairy cows. Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

138.  Wu Q, Tun HM, Law YS, Khafipour E, and Shah NP. 2016. Comparative genomics of Lactobacillus brevis uncovers its common capability for efficiently synthesizing neuroactive γ-aminobutyric acid. Joint Annual Meeting of American Society of Animal Science, American Dairy Science Association, Canadian Society of Animal Science, and Western Section of the American Society of Animal Science, Salt Lake City, YT, USA, Jul 19-23.

137.  Arrazuria R, Derakhshani H, Khafipour E, Perez V, Garrido J, Juste RA, Elguezabal N. 2016. Rabbit gut microbiota modifications induced by Mycobacterium avium subspecies paratuberculosis infection and diet changes. 13th International Colloquium on Paratuberculosis, Nantes, France, Jun 20-24. 

136.  Rabbi MF, Eissa N, Munyaka PM, Khafipour A, Khafipour E, and Ghia JE. 2016. Human catestatin represses reactivation of intestinal inflammation in a murine model of colitis through the M1 macrophages and not the gut microbiota. Digestive Disease Week, San Diego, USA, May 21-24.

135.  Munyaka PM, Rabbi MF, Khafipour A, Khafipour E‡, and Ghia JE. 2016. Acute dextran sulfate sodium (DSS)-induced colitis promotes gut microbial dysbiosis and functional microbial changes in mice. Digestive Disease Week, San Diego, CA, USA, May 21-24.

134.  Wiseman M, Khafipour A, Khafipour E, Hooda S, Wey D, and de Lange CFM. 2016. Using enzymes and inoculants to manipulate the feeding value of DDGS for young pigs. 16th London Swine Conference, London, ON, Canada, Apr 5-6.

133.  Shang Y, Derakhshani H, Sarna LK, Siow YL, Khafipour E‡, and O. K. 2016. Impact of dietary fat on murine gut microbiota and fatty liver. Experimental Biology, San Diego, CA, USA, Apr 2-6.

132.  Rabbi MF, Eissa N, Munyaka PM, Khafipour A, Khafipour E, and Ghia JE. 2016. Reactivation of intestinal inflammation: Role of human catestatin and M1 macrophages. 29th Annual Canadian Society of Immunology Conference, Ottawa, ON, Canada, Apr 1-4.

131.  Kotlowski R, Sepehri S, Khafipour E, Krause DO, and Bernstain CN. 2016. The origin of inflammation in Crohn’s Disease and Ulcerative Colitis. 11th Congress of European Crohn’s and Colitis Organization, Amsterdam, The Netherland, Mar 16-19.

 130.  Rabbi M, Munyaka P, Eissa N, Khafipour A, Khafipour E, and Ghia JE2016. Human Catestatin treatment results in gut microbiota dysbiosis in mice. Canadian Digestive Disease Week, Montreal, QC, Canada, Feb 26-29.

129.  Khafipour A, Munyaka PM, Rabbi MF, Eissa N, Khafipour E‡, and Ghia JE. 2016. Acute 2,4 dinitro benzen sulfonic acid  (DNBS)-induced colitis results in gut microbial dysbiosis in mice. Canadian Digestive Disease Week. Montreal, QC, Canada, Feb 26-29.

 

2015 – 29 abstracts

128.  Jordaan EM, Cicek N, Derakhshani H, and Khafipour E‡. 2015. Adaptation and stability of bacterial community in an anaerobic dairy manure digester after a feed change. 14th IWA World Congress on Anaerobic Digestion, Vina del Mar, Chile, Nov 15-18.

127.  Jordaan EM, Cicek N, Derakhshani H, and Khafipour E‡. 2015. Characterizing anaerobic digestate and feed bacterial communities using high-throughput sequencing. 14th IWA World Congress on Anaerobic Digestion, Vina del Mar, Chile, Nov 15-18.  

126.  Arrazuria R, Elguezabal N, Juste RA, Derakhshani H, and Khafipour E. 2015. Gut microbiome profile in rabbits experimentally infected with Mycobacterium avium subspecies paratuberculosis and fed a regular or a high fiber diet. BioMicroWorld 2015, VI International Conference on Environmental, Industrial and Applied Microbiology, Barcelona, Spain, Oct 28-30. 

125.  Munyaka PM, Khafipour A, Wang H, Eissa N, Khafipour E‡, and Ghia JE‡. 2015. Perinatal antibiotic treatment alters offspring’s gut microbial profile predisposing them to experimental colitis. European United Gastroenterology Week, Barcelona, Spain, Oct 24-28.

124.  Tun HM, Carney JP, Fynn M, Grieger L, and Khafipour E. 2015. Monitoring survivability and infectivity of porcine epidemic diarrhea virus within two different on-farm lagoons through out the fall, winter and into the spring. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16. (Accepted as one of the eight late breaking abstracts to be presented both in poster and oral formats)

123.  Shang Y, Khafipour E‡, Kim JH, and Kim WK. 2015. Ileal mucosa and digesta microbiota of broiler chickens in response to fructooligosaccharide supplementation. Poultry Science Association Annual Meeting, Louisville, KY, USA, Jul 27-30.

122.  Tun HM, Li R, Kiarie E, Nyachoti CM, and Khafipour E. 2015. Impact of xylanases on gut microbiome of growing pigs fed with corn-based and wheat-based diets. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

121.  Tun HM, Khafipour E‡, and Benchaar C. 2015. Effect of dietary linseed oil supplementation on rumen microbiota composition in lactating dairy cows. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

120.  Tun HM, Khafipour E, and Benchaar C. 2015. The impacts of linseed oil supplementation on fecal microbiota in lactating dairy cows. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

119.  Tun HM, Li SC, Yoon I, Scott M, Plaizier JC, and Khafipour E. 2015. Massive shotgun metagenomic sequencing reveals the potential mode of action of Saccharomyces cerevisiae fermentation product (SCFP) on rumen microbiome during subacute ruminal acidosis (SARA) in dairy cows. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

118.  Rahmani M, Derakhshani H, Tun HM, Donogh J, Sepehri S, and Khafipour E. 2015. Bacterial diversity and pathogen load in recovered dairy cows bedding materials following an aerobic composting of dairy manure. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

117.  Li SC, Azevedo P, Danscher AM, Andersen PH, Ezzati P, Wilkins JA, Khafipour E, and Plaizier JC. 2015. The effects of grain-induced subactue ruminal acidosis on blood plasma proteomic characterizationin dairy cows. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

116.  Li SC, Tun HM, Yoon I, Scott M, Plaizier JC, and Khafipour E. 2015. Effects of Saccharomyces cerevisiae fermentation product (SCFP) on the predicted functional profiles of rumen microbiome in lactating dairy cows with subacute ruminal acidosis (SARA). Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

115.  Kwawukume AA, Tun HM, Nyachoti CM, and Khafipour E. 2015. The gut and vaginal microbiota profile of pregnant sows and their contribution to neonatal piglet gut microbiota development. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

114.  Azad E, Forester R, Acharya S, McAllister TA, and Khafipour E. 2015. A comparison of rumen bacterial communities in bloated and non-bloated cattle grazing alfalfa. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

113.  Azad E, Narvaez N, Derakhshani H, Allazeh AY, Wang Y, McAllister TA and Khafipour E. 2015. Shifts in rumen microbiota in response to inoculation with Propionibacterium acidipropionici strain P169. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

112.  Azad E, Rico DE, Derakhshani H, Havartine KJ, and Khafipour E. 2015. Composition of rumen microbiota alters following diet-induced milk fat depression in dairy cows. Joint Annual Meeting of American Society of Animal Science and American Dairy Science Association, Orlando, FL, USA, Jul 12-16.

111.  Wang Y, Tun HM, Jones PJH, Ames NP, and Khafipour E‡. 2015. High molecular weight barley b-glucan promotes a favorable human gut microbiota associated with reduction of cardiovascular diseases (CVD) risk factors.  6th International Dietary Fibre Conference: From Health to Functionality. Paris, France, Jun 1-3. (Received the best poster award along with 1,000 € cash prize)

110.  Amiro B, Akinremi W, Dias G, Khafipour E, Kulshreshtha S, Ominski K, Rawluk C, and Tenuta M. 2015. Beneficial management practices for greenhouse gas mitigation from agroecosystems, with emphasis on cow-calf non-confinement production systems in western Canada. Canadian Society of Soil Science Annual Meeting, Montreal, QC, Canada, Jul 5-10.         

109.  Li R, Tun HM, Khafipour E‡, Kumar A, Fernando WGD, and Farenhorst A. 2015. Using PMA-16S rDNA and 16S rRNA based sequence to discriminate between live and dead bacteria in water samples. CWRA National Conference, Winnipeg, MB, Canada, Jun 2-4.

108.  Eragoda Amarawansha GS, Li R, Mi RD, Zvomuya F, Halldorson T, Tomy G, Khafipour E, and Farenhorst A. 2015. Comparison of drinking water quality in two water distribution systems common to First Nation communities in Manitoba. CWRA National Conference, Winnipeg, MB, Canada, Jun 2-4.

107.  Donogh J, Tun HM, Carney JP, Fynn M, Grieger L, and Khafipour E. 2015. Survivability of porcine epidemic diarrhea virus (PEDv) within two different on-farm lagoons. American Society for Microbiology, New Orleans, LU, USA, May 30- Jun 2.

106.  Sepehri S, Govia R, Poliquin V, Menticoglou S, and Khafipour E. 2015. DNA extraction of amniotic fluid to identify and characterize microbial communities in preterm birth using high throughput sequencing. American Society for Microbiology, New Orleans, LU, USA, May 30- Jun 2.

105.  Kiros T, Petri R, Derakhshani H, Khafipour E, Gabler N, Dekkers J, and Van Kessel A. 2015. Deep-sequencing comparison of the gastrointestinal microbiota of pigs selected for high and low residual feed intake. 13th Digestive Physiology of Pigs, Kliczkow, Poland, May 19-21.

104.  Munyaka P, Khafipour E‡, and Ghia JE. 2015. Prenatal antibiotic treatment increases offspring’s susceptibility to experimental colitis: a role of the gut microbiota. Digestive Disease Week, Washington, DC, USA, May 17-19

103.  Khafipour E, Donogh J, and Tun HM. 2015. Survivability and infectivity of porcine epidemic diarrhea virus (PEDv) in the lagoons under cold Manitoba environments. Waste To Worth, Seattle, WA, USA,Mar 30- Apr 3.

102.  Azad MB, Azad E, Qasem W, Cai C, Khafipour E, and Friel J. 2015. Complementary feeding of breast-fed infants: impact on gut microbiota and gut inflammation. The International Human Microbiome Congress, Luxembourg, Mar 31- Apr 2.

101.  Li R, Tun HM, Khafipour E‡, Kumar A, Fernando WGD, and Farenhorst A. 2015. Differentiating between live and dead bacteria in water samples using PMA-16S rDNA and 16S rRNA based sequence. Canadian Water Network, Connecting Water Resources Conference, Ottawa, ON, Canada, Mar 10-12.

100.  Mi RD, Harries JE, Li R, Eragoda Arachchilage GS, Khafipour E, and Farenhorst A. 2015. Use of UV probes for inactivating E. coli and total coliforms in First Nations drinking water and river water. Canadian Water Network, Connecting Water Resources Conference, Ottawa, ON, Canada, Mar 10-12.

 

2014 – 29 abstracts

99.  Plaizier JC, Li S, Gozho GN, Danscher AM, Khafipour E, Penner G, and Andersen PH. 2014. Impact of ruminal acidosis on cow health and performance. 28th American Dairy Science Association Discover Conference on Food Animal Agriculture – Starch for Ruminants, Northern Illinois University, Naperville, IL, USA, Oct 6-9.

98.  Friel J, Azad E, Azad MB, Qasem W, Cai C, and Khafipour E. 2014. Iron and complementary feeding of breast-fed infants: impact on gut inflammation and the gut microbiota. 17th International Society for Research on Human Milk and Lactation (ISRHML) Conference: From Human Milk Molecules to Population Health:  Research Advancements, Kiawah Island, South Carolina, USA, Oct 23-27.

97.  Munyaka P, Rabbi FA, Khafipour E, Tracey KJ, Pavlov VA, and Ghia JE. 2014. Central muscarinic cholinergic activation alters interaction between splenic cendritic cell and CD4+CD25- T cells in experimental colitis. UEG Week, Vienna, Austria, Oct 18-22.

96.  Penner GB, Khafipour E, Plaizier JC, and Guan LL. 2014. The microbiome and animal health. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24. (Invited talk in Ruminant Nutrition Symposium: The rumen microbiome and nutritional health and production)

95.  Li S, Azevedo P, Steele M, Carson M, Plaizier JC, Derakhshani H, and Khafipour E. 2014. The microbiome composition of the hindgut is altered following weaning in dairy calves: impact of different weaning strategies. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24.

94.  Li S, Azevedo P, Steele M, Carson M, Plaizier JC, Derakhshani H, and Khafipour E. 2014. Development of rumen microbiota in dairy calves: impact of weaning and different weaning strategies. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24.

93.  Li S, Danscher AM, Andersen PH, Khafipour E, Kristensen NB, and Plaizier JC. 2014. The effects of grain-induced subactue ruminal acidosis on interleukin-6 and acute phase response in dairy cows. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24.

92.  Kotz AJ, Li S, McGeough EJ, Khafipour E, and Plaizier JC. 2014. Diurnal variations in enteric methane emissions from non-lactating dairy cows offered diets differing in forage to grain ratio. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24.

91.  Khazanehei HR, Li S, Plaizier JC, and Khafipour E. 2014. Effects of different dry period managements on rumen microbiome composition. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24. (Invited talk in Ruminant Nutrition Symposium: The rumen microbiome and nutritional health and production)

90.  Derakhshani H, Alqarni S, Khazanehei HR, Cardoso FC, Plaizier JC, Khafipour E, and Loor JJ. 2014. The microbiome composition of the rumen is altered during the peripartal period in dairy cattle. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24. (Presidential Pick’s; one of the 36 posters – among 1200 posters – selected by ASAS presidents – past president, president, president elect – to be presented in ASAS award ceremony)

89.  McCann JC, Alqarni SA, Luan S, Cardoso P, Khafipour E, and Loor JJ. 2014. Induction of subacute ruminal acidosis affects the rumen microbiome. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24.

88.  McCann JC, Alqarni SA, Segers JR, Shike DW, Khafipour E, and Loor JJ. 2014. Increasing condensed corn distillers solubles alters the rumen microbiome of beef cattle. ADSA, ASAS, CSAS Joint Annual Meeting, Kansas City, MO, Jul 20-24.

87.  Nandha NK, Munyaka PM, Kiarie E, Nyachoti CM, and Khafipour E. 2014. Impact of fibre degrading feed enzymes on gut microbiome profile in broiler chickens fed corn/corn DDGS or viscous grains (wheat, barley and rye) based diets. Poultry Science Association Annual Meeting, Corpus Christi, TX, Jul 14-17.

86.  Nandha NK, Munyaka PM, Kiarie E, Nyachoti CM, and Khafipour E. 2014. Impact of fibre degrading feed enzymes on growth performance and nutrient utilization in broiler chickens fed corn/corn DDGS or viscous grains (wheat, barley and rye) based diets. Poultry Science Association Annual Meeting, Corpus Christi, TX, Jul 14-17.

85.  Shang Y, Derakhshani H, Khafipour E, Kim JH, and Kim WK. 2014. Effect of fructooligosaccharide supplementation on the ileum and cecum microbiotas of broiler chickens fed a low calcium and available phosphorous diet. Poultry Science Association Annual Meeting, Corpus Christi, TX, Jul 14-17.

84.  Li R, Tun HM, Kahfipour E, Kumar A, Fernando WGD, and Farenhorst A. 2014. Comparison of PMA-based 16S rDNA and 16S rRNA Illumina sequencing methods to discriminate dead and active microbes in water samples. Annual CREATE H2O meeting, Winnipeg, MB, Jun 25-26.           

83.  Munyaka PM, Ghia JE, Bernstein CN, and Khafipour E. 2014. Intestinal microbiome profile in a piglet model of inflammatory bowel disease (IBD): The impact of prebiotic (resistant starch) and Escherichia coli-derived probiotics. International Scientific Conference on Prebiotics and Probiotics, Budapest, Hungary, Jun 24-26. (Winner- Second place for best poster presentation)

82.  Danscher AM, Derakshani H, Li S, Plaizier JC, Andersen PH, and Khafipour E. 2014. Alteration in fecal microbiota associated with grain-induced subacute ruminal acidosis (SARA) challenge in dairy cows. International Scientific Conference on Prebiotics and Probiotics, Budapest, Hungary, Jun 24-26.

81.  Khafipour E, Munyaka PM, Bernstein CN, and Ghia JE. 2014. Therapeutic role of prebiotic (resistant starch) and Escherichia coli-derived probiotics in piglets infected with adherent invasive Escherichia coli  (AIEC) UM146: A model of inflammatory bowel disease (IBD). International Scientific Conference on Prebiotics and Probiotics, Budapest, Hungary, Jun 24-26.

80.  Azad E, Narvaez N, Derakhshani H, Allazeh AY, Wang Y, McAllister TA, and Khafipour E. 2014.  Effect of Propionibacterium acidipropionici, P169 on rumen and fecal microbiota of beef cattle fed a corn-based diet. International Scientific Conference on Prebiotics and Probiotics, Budapest, Hungary, Jun 24-26. (Nominated- One of the ten best oral presentations nominated for Young Scientist Award)

79.  Derakhshani H, De Buck J, Mortier R, Barkema HW, and Khafipour E. 2014. Gut microbiota profiling of dairy calves infected by Mycobacterium avium subspecies paratuberculosis (MAP): impacts of infection dose and age at the time of infection. 12th International Colloquium on Paratuberculosis, Parma, Italy, Jun 22-26.

78.  Munyaka PM, Ghia JE, Bernstein CN, and Khafipour E. 2014. AIEC Pathobiont and Carrageenan Gum Alter Gut Microbiome Profile in a Pig Model of Inflammatory Bowel Disease (IBD). Gut Microbiology from Sequence to Function, Aberdeen, United Kingdom, Jun 16-19.

77.  Danscher AM, Derakshani H, Li S, Plaizier JC, Andersen PH, and Khafipour E. 2014. Rumen microbiome composition in cattle during grain-induced subacute ruminal acidosis (SARA). Gut Microbiology from Sequence to Function, Aberdeen, United Kingdom, Jun 16-19.

76.  Tun HM, Zhang W, Hartmann RJ, Elson CO, Khafipour E, and Gravey WT. 2014. High-fat diet induces insulin resistance through alteration of gut microbiota in mice independent of toll-like receptor 5 (TLR-5). Canadian Student Health Research Forum, Winnipeg, MB, Jun 10-12.

75.  Forbes JD, Tang W, Sepehri S, Van Domselaar G, Krause DO, Khafipour E, and Bernstein CN. 2014. Microbial analysis of intestinal mucosal tissue investigating the association of anatomical site and inflammation status in patients with inflammatory bowel disease. Canadian Student Health Research Forum, Winnipeg, MB, Jun 10-12.

74.  Munyaka PM, Ghia JE, Bernstein CN, and Khafipour E. 2014. Resistant starch and Escherichia coli-derived probiotics alter intestinal microbiome in a piglet model of inflammatory bowel disease. Canadian Student Health Research Forum, Winnipeg, MB, Jun 10-12.

73.  Derakhshani H, De Buck J, Mortier R, Barkema HW, and Khafipour E. 2014. Gut microbiota profiling of dairy calves infected by Mycobacterium avium subspecies paratuberculosis (MAP). Canadian Student Health Research Forum, Winnipeg, MB, Jun 10-12. (Winner- Prize for excellence in Manitoba Health Research Poster Competition awarded by the Faculty of Medicine and Manitoba Medical Service Foundation)

72.  Forbes JD, Tang W, Sepehri S, Van Domselaar G, Krause DO, Khafipour E, and Bernstein CN. 2014. Microbial analysis of intestinal mucosal tissue investigating the association of anatomical site and inflammation status in patients with inflammatory bowel disease. Digestive Disease Week, Chicago, IL, May 3-6.

71.  Wang Y, Ames NP, Li S, Jones PJ, and Khafipour E. 2014. High molecular weight barley beta-glucan supports bacterial populations beneficial for gut health. Experimental Biology, San Diego, CA, Apr 26-30.

 

2013– 19 abstracts

70.  Khafipour E. 2013. Microbiome as a predictive tool in health and disease. Canada NGS Symposia hosted by Genome Quebec, Montreal, QC, Nov 15-16.

69.  Khafipour E and Derakhshani H. 2013. Microbiome as a predictive tool for health and disease – do we really understand it? 6th Canadian MAP meeting, Banff, AB, Oct 22-25.

68.  Derakhshani H and Khafipour E†. 2013. High-throughput microbial analysis of gastrointestinal tract confirms age and dose susceptibility of dairy calves to Mycobacterium avium subsp. Paratuberculosis. 6th Canadian MAP meeting, Banff, AB, Oct 22-25.

67.  Hamm A, Tenuta M, Krause DO, Ominski KO, Khafipour E, and Flaten D. 2013. Bacterial profiles of agricultural soil fertilized with solid hog and dairy manure, and synthetic N fertilizer. Canadian Society of Soil Science, Manitoba Soil Science Society, Canadian Society of Agricultural and Forest Meterology, Winnipeg, MB, Jul 22-25.

66.  Munyaka PM, Hartmann RJ, Rodriguez-Lecompte JC, Ghia JE, Krause DO, and Khafipour E. 2013. Gut microbiome profile of early weaned piglets in response to crowding stress, Escherichia coli K88+ challenge, and anti-E. coli K88 probiotics. ADSA, ASAS Joint Annual Meeting, Indianapolis, IN, Jul 8-12.

65.  Li S, Khafipour E, Yoon I, Scott M, and Plaizier JC. 2013. Effects of Saccharomyces cerevisiae fermentation product (SCFP) on bacteria in the rumen and hindgut of lactating dairy cows during subacute ruminal acidosis (SARA). ADSA, ASAS Joint Annual Meeting, Indianapolis, IN, Jul 8-12.

64.  Khazenehei HR, Li S, Plaizier JC, and Khafipour E. 2013. Effects of different dry period managements on rumen microbiota before and after calving. ADSA, ASAS Joint Annual Meeting, Indianapolis, IN, Jul 8-12.

63.  De Nardi R, Segato S, Plaizier JC, Li S, Khafipour E, Andrighetto I, and Marchesini G. 2013. Use of organic acids and polyphenols to mitigate induced ruminal acidosis in dairy heifers. ADSA, ASAS Joint Annual Meeting, Indianapolis, IN, Jul 8-12.

62.  Danscher AM, Li S, Andersen PH, Khafipour E, Kristensen NB, and Plaizier JC. 2013. Biomarkers for bovine rumen acidosis. ADSA, ASAS Joint Annual Meeting, Indianapolis, IN, Jul 8-12.

61.  Danscher AM, Li S, Andersen PH, Khafipour E, Kristensen NB, and Plaizier JC. 2013. In search of indicators of bovine subacute rumen acidosis (SARA). 15th Conference on Production Diseases in Farm Animals, Uppsala, Sweden, Jun 24-28.

60. Jahan M, Khafipour E, and Holley RA. 2013. Role of surface protein (esp) and gelatinase (gelE) genes plus gelatinase activity in biofilm formation by enterococci from raw and fermented meat. Canadian Society for Microbiology Meeting, Ottawa, ON, Jun 17-20.

59.  Khafipour E and Wang Y. 2013. Probiotics in Animal Nutrition: Current and Future. Probiotics and Prebiotics: Understanding the Science and Opportunities, Winnipeg, MB, Jun 17-18.

58.  Pu S, Khazanehei HR, Nandha NK, Krause DO, Jones PJ, and Khafipour E. 2013. Effects of unsaturated fatty acids (USFA) on human gut microbiome profile in canola oil multicenter randomized controlled trial (COMIT). Experimental Biology, Boston, MA, Apr 20-24.

57.  Khazenehei HR, Li S, Plaizier JC, and Khafipour E†. 2013. Effects of shortening dry period and using single close-up diet on rumen microbiome of Holstein dairy cows. Congress on Gastrointestinal Function, Chicago, IL, Apr 15-17.

56.  Li S, Khafipour E, Yoon I, Scott M, and Plaizier JC. 2013. Saccharomyces cerevisiae fermentation product (SCFP) stabilized rumen microbial communities of lactating dairy cows during subacute ruminal acidosis. Congress on Gastrointestinal Function, Chicago, IL, Apr 15-17.

55.  Munyaka P, Khafipour E, Krause DO, and Rodriguez-lecompte JC. 2013. Effect of crowding stress on various performance and immunological parameters in piglets challenged with Escherichia coli K88+, and in piglets challenged with E. coli K88+ and supplemented with anti- K88+ E. coli probiotics. Prairie University Biology Symposium, Winnipeg, MB, Feb 21-23.

54.  Kotz A, Plaizier JC, Li S, Ominski KH, and Khafipour E. 2013. Linking enteric methane emissions in cattle with fecal microbiome enterotype. Prairie University Biology Symposium, Winnipeg, MB, Feb 21-23.

53.  Hartmann RJ, Wolf KJ, Tanner SM, Lorenza RJ, and Khafipour E. 2013. Acidic beverages alter the commensal microbiota and decrease the risk of type-1 diabetes in the NOD mouse model. Prairie University Biology Symposium, Winnipeg, MB, Feb 21-23.

52.  Derakhshani H, De Buck J, Mortier R, Barkema HW, Hendrick SH, Krause DO, and Khafipour E. 2013. Use of fecal microbial community pattern for early diagnosis of Johne’s disease in cattle. Prairie University Biology Symposium, Winnipeg, MB, Feb 21-23.

 

2012– 13 abstracts

51.  Kotlowski R, Sepehri S, Krause DO, Khafipour E, and Bernstein CN. 2012. Apoptosis induced by pathogenic Escherichia coli as primary source of intestinal inflammation in Crohn’s Disease and Ulcerative Colitis. Advances in Inflammatory Bowel Diseases, Crohn’s & Colitis Foundation’s Clinical & Research Conference, Hollywood, FL. Dec.  

50.  Khafipour E. 2012. Gut microbiome profile as a diagnostic tool for early detection of Johne’s disease in cattle. 5th Canadian MAP meeting, Banff, AB, Oct 11-12.

49.  Khafipour E†, Nandha NK, Yitbarek A, Christiuk K, Meshkibaf S, Krause DO, and Rodriguez-Lecompte JC. 2012. Effects of crowding and social stress, and Escherichia coli K88+ (ETEC) challenge on gut mucosal inflammation in early-weaned piglets supplemented with anti-E. coli K88+ probiotics. Prairie Infectious Immunology Network Conference, Moose Jaw, SA, Sep 19-21.

48.  Hartmann RJ, Rodriguez-Lecompte JC, Krause DO, and Khafipour E. 2012. Gut Microbiome profile of early weaned piglets in response to crowding and social stress, Escherichia coli K88+ (ETEC) challenge, and anti-E. coli K88+ probiotics. Prairie Infectious Immunology Network Conference, Moose Jaw, SA, Sep 19-21.

47.  Forbes JD, Tang W, Sepehri S, Van Domselaar G, Bernstein CN, Krause DO, and Khafipour E. 2012. Comparative metagenomic analysis of gut biopsies investigating the association of anatomical site and inflammation status in patients with inflammatory bowel disease. Prairie Infectious Immunology Network Conference, Moose Jaw, SA, Sep 19-21.

46.  Christiuk K, Hartmann R, Forbes JD, Ominski KH, Plaizier JC, Krause DO, and Khafipour E. 2012. Rumen microbiome profile during cold stress/adaptation in cattle fed low protein diets supplemented with dried distillers grain with solubles (DDGS). The 14th International Symposium on Microbial Ecology, Copenhagen, Denmark, Aug19-24.

45.  Forbes JD, Van Domselaar G, Bernstein CN, Krause DO, and Khafipour E. 2012. Metagenomic analysis of water supply in geographically defined areas of low and high incidence rates of inflammatory bowel disease in Manitoba, Canada. The 14th International Symposium on Microbial Ecology, Copenhagen, Denmark, Aug19-24.

44.  Forbes JD, Hendric SH, De Buck J, Barkema HW, Van Domselaar G, Krause DO, and Khafipour E. 2012. Gut microbiome analysis and novel microbial based diagnostics for Johne’s disease in cattle. The 14th International Symposium on Microbial Ecology, Copenhagen, Denmark, Aug19-24.

43.  Forbes JD, De Buck J, Barkema HW, Hendric SH, Van Domselaar G, Krause DO, and Khafipour E. 2012. Gut microbiome analysis of infected calves with low or high doses of Mycobacterium avium subspecies paratuberculosis (MAP) at different ages identifies specific bacteria associated with the outcome. The 14th International Symposium on Microbial Ecology, Copenhagen, Denmark, Aug19-24.

42.  Christiuk K, Krause DO, Ominski KH, De Kievit TR, and Khafipour E. 2012. Impact of diet on the abundance and diversity of fecal Escherichia coli shed from cattle in overwintering environments. ADSA, AMPS, ASAS, CSAS, WSASAS Joint Annual Meeting, Phoenix, AZ, Jul 15-19.

41.  Li S, Tesfaye EG, Khazanehei H, Scott M, Yoon I, Khafipour E, and Plaizier JC. 2012. Impact of feeding yeast culture under Normal and SARA Conditions in Lactating Dairy Cows. ADSA, AMPS, ASAS, CSAS, WSASAS Joint Annual Meeting, Phoenix, AZ, Jul 15-19.

40.  Li S, Khazanehei H, Khafipour E, and Plaizier JC. 2012. Effect of cecum starch infusion on hindgut fermentation and inflammatory response in dairy cattle. ADSA, AMPS, ASAS, CSAS, WSASAS Joint Annual Meeting, Phoenix, AZ, Jul 15-19.

39.  Forbes JD, Van Domselaar G, Bernstein CN, Krause DO, and Khafipour E. 2012. Characterization of water microbiome in areas with high and low incidence rate of inflammatory bowel disease. Manitoba Graduate Student Poster Competition, Winnipeg, MB, Jun 7-8.

 

2011– 3 abstracts

38.  Khafipour E, Li S, Plaizier JC, Dowd SE, and Krause DO. 2011. Microbiome analysis of the rumen, cecum, and feces of dairy cows with subacute ruminal acidosis. J. Anim. Sci. Vol. 89, E-Suppl. 1/J. Dairy Sci. Vol. 94, E-Suppl. 1: 489.

37.  Li S, Plaizier JC, Khafipour E, and Krause DO. 2011. Effects of subacute ruminal acidosis (SARA) challenges on bacteria in the digestive tract of dairy cows. J. Anim. Sci. Vol. 89, E-Suppl. 1/J. Dairy Sci. Vol. 94, E-Suppl. 1: 624.

36.  Fernando WGD, Li R, Khafipour E, Krause DO, Entz MH, and de Kievit TR. 2011. Integrating molecular and culture based methods to comprehensively explore bacterial communities that influence canola health under differing cropping system. International Rapeseed Congress, Prague, Czech Republic, Jun 5-9.

 

2010– 10 abstracts

35.  Li R, Khafipour E, Krause DO, Entz MH, de Kievit TR, and Fernando WGD. 2010. Assessment of bacterial communities that influence plant health in different cropping systems using high throughput 454-pyrosequencing. Canadian Phytopathological Society Regional Meeting. Winnipeg, MB, Dec 9.

34.  Fernando WGD, Li R, Khafipour E, Krause DO, Entz MH, and de Kievit TR. 2010. Pyrosequencing and T-RFLP are useful tools in Ag-Biotech innovation to give novel information on bacterial communities that influence plant health for sustainable growth under different cropping systems. World Congress of Industrial Biotechnology, Dilan, China, Jul 25-27.

33.  Khafipour E, Berard NC, Little AC, Li S, Dowd SE, Plaizier JC, and Krause DO. 2010. First metagenomics analysis of the rumen microbiome of dairy cows with subacute ruminal acidosis and identification of specific Escherichia coli virulence factors. J. Anim. Sci. Vol. 88, E-Suppl. 2/J. Dairy Sci. Vol. 93, E-Suppl. 1/Poult. Sci. Vol. 89, E-Suppl. 1: iii. (Accepted as one of the eight late breaking abstracts to be presented both in poster and oral formats)

32.  Kroeker AD, Li S, Shekar S, Ceballos A, Khafipour E, Krause DO, Plaizier JC, and Rodriguez-Lecompte JC. 2010. Characterization of immune and metabolic responses in the blood of dry cows induced with subacute ruminal acidosis (SARA). J. Anim. Sci. Vol. 88, E-Suppl. 2/J. Dairy Sci. Vol. 93, E-Suppl. 1/Poult. Sci. Vol. 89, E-Suppl. 1: 765.

31.  Li S, Kroeker A, Khafipour E, Rodriguez-Lecompt JC, Krause DO, and Plaizier JC. 2010. Effects of subacute ruminal acidosis challenges on lipopolysaccharide endotoxin (LPS) in the rumen, cecum, and feces of dairy cows. J. Anim. Sci. Vol. 88, E-Suppl. 2/J. Dairy Sci. Vol. 93, E-Suppl. 1/Poult. Sci. Vol. 89, E-Suppl. 1: 433.

30.  Lonescu C, Meshkibaf S, Bhandari SK, Zhu F, Khafipour E, Nyachoti MC, Bravo D, and Krause DO. 2010. In vivo evaluation of charcoal to prevent post-weaning pig diarrhea in an Escherichia coli K88 challenge experiment. J. Anim. Sci. Vol. 88, E-Suppl. 2/J. Dairy Sci. Vol. 93, E-Suppl. 1/Poult. Sci. Vol. 89, E-Suppl. 1: 654.

29.  Plaizier JC, Khafipour E, Li S, Gozho GN, and Krause DO. 2010. Subacute rumen acidosis (SARA), endotoxins and health consequences. Dairy Solution Symposium: Rumen Health a 360° Analysis, Utrecht, The Netherlands, Jul 1-2. 

28.  Krause DO, Khafipour E, Little AC, Berard NC, Li S, and Plaizier JC. 2010. Rumen microbiome dynamics during subacute ruminal acidosis. 14th International Conference on Production Diseases in Farm Animals. Ghent, Belgium, Jun 20-2